Alisa Omelchenko
Summary
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SeniorAlisa Omelchenko is a 4th-year PhD candidate in the CMU-Pitt joint Computational Biology program, dedicated to building open-source computational tools that are practical for non-computational biology labs. With eight years of combined wet-lab and research experience, she has led lab operations as Virginia Tech's Laboratory Manager and contributed to biotech research teams at Landos Biopharma, NYU Langone Health, and more. Her academic path spans a PhD from the University of Pittsburgh School of Medicine and interdisciplinary studies at Carnegie Mellon, along with a BS in BioMolecular Sciences from NYU and an MS in Biotechnology from NYU Tandon. Based in New York, she pursues research that bridges experimental biology and software, aiming to make robust computational methods broadly accessible. She is an active advocate for open-source biology tooling, translating complex computational techniques into usable resources for diverse laboratories.
8 years of coding experience
Github Skills (14)
deconvolution8
robust6
movie6
spike6
extraction6
microscopy6
imaging5
toolbox5
visualization4
scale4
biomechanics4
large-scale4
python4
pipeline2
Programming languages (3)
Github contributions (5)
AlisaOmel/run-randomise
Mar 2017 - Apr 2019
Contributions:11 PRs, 13 pushes, 5 branches in 2 years
niflylab/CalciumImagingAnalysis
Jun 2021 - Jun 2022
Contributions:19 pushes in 1 year
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