Adam Hospital

Work Package Leader - Portable Environments For Computing And Data Resources

Barcelona, Catalonia, Spain
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Summary

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Adam Hospital is a research-focused software engineer and work package leader with over a decade of applied bioinformatics experience and seven years of focused industry practice, based in Barcelona. He combines a Computer Science engineering background with a PhD in Biotechnology to build portable, reproducible environments and automation for computational biomolecular research across projects like BioExcel, ELIXIR and the MuG VRE. His contributions to the Bioconda ecosystem demonstrate practical DevOps skills—packaging and automating bioinformatics tools to make complex software broadly usable. Adam bridges research and infrastructure, translating biological questions about macromolecular structures into production-ready pipelines and containerized deployments. Colleagues rely on him for pragmatic solutions that scale from lab workflows to national bioinformatics resources.
code7 years of coding experience
job6 years of employment as a software developer
bookComputer Science Engineering, Computer Science, Computer Science Engineering, Computer Science at Facultat d'Informàtica de Barcelona, Universitat Politècnica de Catalunya
bookDoctor of Philosophy (PhD), Biotechnology, Doctor of Philosophy (PhD), Biotechnology at Universitat de Barcelona
languagesEnglish, Catalan, Spanish, French
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Github Skills (5)

conda10
bash10
package-management10
build-automation9
bioinformatics9

Programming languages (5)

ShellHTMLJupyter NotebookCommon Workflow LanguagePython

Github contributions (5)

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bioconda/bioconda-recipes

Feb 2021 - Jan 2023

Conda recipes for the bioconda channel.
Role in this project:
userDevOps Engineer / Automation Engineer
Contributions:161 reviews, 9 commits, 41 PRs in 1 year 11 months
Contributions summary:Adam primarily contributed to the creation and maintenance of Conda recipes for bioinformatics tools. Their work involved modifying build scripts, integrating new packages (biobb_amber, flexserv), and automating the installation and configuration process. The user also appears to be involved in the merge and integration of updates and new package versions within the Bioconda ecosystem. These contributions indicate a focus on package management and build automation within the context of scientific software distribution.
recipescondabiocondabioinformaticspackage-management
bioexcel/biobb_hpc_workflows

Sep 2021 - Feb 2022

Contributions:11 pushes, 1 branch in 5 months
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Adam Hospital - Work Package Leader - Portable Environments For Computing And Data Resources