Akshatha Nayak

Graduate Research Assistant

Austin, Texas, United States
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Summary

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Senior
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Top School
Akshatha Nayak is a computational cancer genomics researcher and PhD candidate with a decade of experience bridging bioinformatics, large-scale genomics, and applied machine learning. Having contributed to EMBL-EBI’s FAANG data portal and driven genome-scale analyses of non-B DNA structures and G-quadruplexes, she combines domain expertise in cancer biomarkers with practical engineering experience from roles at Oracle and Johnson & Johnson. Her work spans algorithm optimization for chromosomal breakpoint detection to validating ML models for preclinical drug safety, reflecting a rare mix of rigorous research and production-minded validation. Based in Austin, she is building a research program that interrogates how passenger mutations shape cancer development, bringing computational depth and cross-institutional collaboration to translational genomics.
code10 years of coding experience
job6 years of employment as a software developer
bookDoctor of Philosophy - PhD Computer Science, Doctor of Philosophy - PhD Computer Science at The University of Texas at Austin
bookDoctor of Philosophy - PhD (Transferred) Bioinformatics and Genomics, Doctor of Philosophy - PhD (Transferred) Bioinformatics and Genomics at Penn State University
bookBachelor's degree Computer Science and Engineering, Bachelor's degree Computer Science and Engineering at Rajiv Gandhi Institute of Technology, Kottayam
bookKendriya Vidyalaya Sangathan
languagesEnglish, Hindi, Konkani
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Github Skills (32)

markdown10
appwrite10
javascript10
dsa-algorithm10
portal10
stackoverflow9
binder9
frontend8
notebook7
terminal-app7
metadata7
pypi7
jupyter-notebook7
validate6
pygame6

Programming languages (5)

TypeScriptC++JavaScriptHTMLPython

Github contributions (5)

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Aksh77/seva-frontend

Mar 2018 - Mar 2018

Contributions:25 commits, 23 pushes, 1 branch in 1 day
FAANG/dcc-kubernetes-configs

Jan 2021 - Jun 2023

Contributions:2 reviews, 7 PRs, 31 pushes in 2 years 5 months
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Akshatha Nayak - Graduate Research Assistant