Alexander Blume

Postdoctoral Researcher at Max Delbrück Center

Berlin, Germany
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Summary

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Senior
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Alexander Blume is a Berlin-based postdoctoral researcher and bioinformatician with a decade of experience building reproducible genomics pipelines, analyzing genome-wide epigenetic data, and maintaining R/Bioconductor packages. At the Max Delbrück Center’s Berlin Institute for Systems Biology he blends hands-on software development with applied research, having worked across labs to translate computational methods into robust, reproducible workflows. His background combines a PhD in Bioinformatics and Computational Biology with practical tooling expertise, making him fluent in both research design and production-ready analysis pipelines. Colleagues value his attention to reproducibility and package maintenance—tasks that quietly scale scientific impact across teams.
code11 years of coding experience
job1 year of employment as a software developer
bookMaster of Science - MS, Bioinformatics, Master of Science - MS, Bioinformatics at Freie Universität Berlin
bookDoctor of Philosophy - PhD, Bioinformatics and Computational Biology, Doctor of Philosophy - PhD, Bioinformatics and Computational Biology at Humboldt University of Berlin
languagesGerman, English, French
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Stackoverflow

Stats
106reputation
2kreached
6answers
1question
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Github Skills (58)

docker10
visualization10
spark10
snakemake10
predict10
r-package10
r10
kafka10
dbt10
fastq10
sequencing10
guix10
bioinformatics10
data-engineering9
deconvolution9

Programming languages (9)

RShellC++RustJavaScriptHTMLJupyter NotebookPython

Github contributions (5)

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alexg9010/genomation

Jun 2016 - Dec 2017

Contributions:2 PRs, 18 pushes, 6 branches in 1 year 6 months
r-packagebioinformaticsgenomicvisualization
BIMSBbioinfo/pigx_chipseq

Feb 2018 - Apr 2022

Pipeline for Analysis of ChIP-Seq data
Contributions:20 releases, 3 reviews, 278 commits in 4 years 3 months
chip-seqchipseqpipelinesnakemakeguix
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