Alexandr Kalinin
Senior Machine Learning Scientist at Biohub
San Francisco, California, United States
Summary
👤
Senior🎓
Top SchoolAlexandr Kalinin is a Senior Machine Learning Scientist with 13 years of experience applying AI/ML to biomedical discovery, currently leading MLxBio efforts at CZ Biohub in San Francisco. He holds a PhD in Bioinformatics from the University of Michigan and has a strong track record across academic and translational research roles at the Broad Institute, Shenzhen Research Institute of Big Data, and UMich, bridging theory and practice in genomics and health data. Alexandr combines deep research credentials—documented in a substantial publication record—with hands-on engineering from earlier software roles, enabling reproducible ML pipelines and deployable bioinformatics tools. Notably, his career blends international postdoctoral collaborations and industry-facing projects, reflecting an ability to translate complex models into applied biomedical solutions.
13 years of coding experience
14 years of employment as a software developer
Doctor of Philosophy (Ph.D.) Bioinformatics, Doctor of Philosophy (Ph.D.) Bioinformatics at University of MichiganMaster's degree Applied Mathematics and Computer Science, Master's degree Applied Mathematics and Computer Science at Novosibirsk State Technical University (NSTU)
Russian, English
Stackoverflow
3reputation
93reached
0answers
1question
Github Skills (121)
xgboost10
python10
toolbox10
deep-learning10
genomics10
computational-biology10
microscopy10
portable10
image-analysis10
nvidia-docker10
statistics10
gradient10
data-visualization10
biology10
data-science10
Programming languages (10)
Github contributions (5)
SOCR/3d-cell-morphometry
Jun 2018 - Jul 2022
Contributions:5 commits, 16 pushes, 1 branch in 4 years 1 month
SOCR/pubmed-vis
Jul 2013 - Nov 2015
Contributions:1 release, 24 commits, 6 PRs in 2 years 4 months
socrpubmedvisualization
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