Alexis Praga

Medical Biologist at CHU de Besançon

Albertville, Auvergne-Rhône-Alpes, France
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Summary

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Rockstar
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Alexis Praga is a multidisciplinary engineer and physician-scientist blending 11 years of experience in high-performance computing, computational mathematics, and molecular genetics. Holder of a PhD in HPC and an MD in medical biology, he has developed scalable, massively parallel atmospheric chemistry models and transitioned into clinical cytogenetics and molecular diagnostics at CHU de Besançon. His technical toolkit spans MPI/OpenMP, Fortran and profiling on supercomputers, while his medical training grounds him in genetic diagnostics and laboratory practice. Comfortable moving between research labs and hospital settings, he brings a rare combination of low-level parallel computing expertise and hands-on molecular biology. An unconventional detail: he pairs a background in history with deep technical and clinical credentials, reflecting broad intellectual curiosity and communication skills.
code11 years of coding experience
job9 years of employment as a software developer
bookDES de Biologie Médicale - Génétique, DES de Biologie Médicale - Génétique at Université Marie et Louis Pasteur
bookLicence Histoire, Licence Histoire at Université Paris Nanterre
bookPasserelle en 3e année de médecine, Passerelle en 3e année de médecine at Faculté de médecine de Nancy
bookEngineer's degree Computational and Applied Mathematics, Engineer's degree Computational and Applied Mathematics at National School of Computer Science and Applied Mathematics of Grenoble
languagesEnglish, Japanese, French
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Github Skills (200)

command-line-interface10
vim10
command-line-tool10
doi10
api10
neural-network10
julia10
directory-tree10
zsh10
visualization10
taskwarrior10
php10
deep-neural-networks10
command-line10
xonsh10

Programming languages (29)

C#CCMakeMakefileElmGoNextflowHTML

Github contributions (5)

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apraga/nixpkgs

Aug 2022 - May 2026

Nix Packages collection
Contributions:281 pushes, 74 branches in 3 years 9 months
nixosnix-packages
alexDarcy/haskell-scripts

Nov 2015 - Mar 2021

Contributions:43 pushes, 3 branches in 5 years 4 months
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