Alexis Robitaille
Postdoctoral Researcher at Leibniz-Institut für Virologie (LIV)
Hamburg, Germany
Summary
👤
Senior🎓
Top SchoolAlexis Robitaille is a postdoctoral researcher in bioinformatics with 11 years of experience specializing in viral genomics and next-generation sequencing analysis. Based at the Heinrich-Pette-Institute in Hamburg, he applies computational pipelines to detect and characterize viral sequences in human samples, building on a PhD from Université Claude Bernard Lyon 1 and extensive WHO/IARC collaborations. His work spans somatic variant calling, mutational signature analysis, and integration of tools into reproducible platforms like Galaxy, reflecting strong practical expertise in tool development and pipeline deployment. Colleagues value his curiosity and rapid learning: he often bridges wet-lab questions and bioinformatic solutions, turning complex viral datasets into actionable insights.
11 years of coding experience
Bachelor's Degree, Biomathematics, Bioinformatics, and Computational Biology, Licence Génie Physiologique et Informatique, Bachelor's Degree, Biomathematics, Bioinformatics, and Computational Biology, Licence Génie Physiologique et Informatique at Université de PoitiersDoctor of Philosophy - PhD, Bioinformatics, Doctor of Philosophy - PhD, Bioinformatics at Université Claude Bernard Lyon 1Master's Degree, Biomathematics, Bioinformatics, and Computational Biology, Master en Bioinformatique et Biologie des Systèmes, Master's Degree, Biomathematics, Bioinformatics, and Computational Biology, Master en Bioinformatique et Biologie des Systèmes at Université Paul Sabatier (Toulouse III)Higher National Diploma in Technology - Bioinformatics, Bioinformatics, Diplôme Universitaire et Technologique Génie Biologie Option Bioinformatique, Higher National Diploma in Technology - Bioinformatics, Bioinformatics, Diplôme Universitaire et Technologique Génie Biologie Option Bioinformatique at Université d'Auvergne (Clermont-Ferrand I)
French, English, Spanish
Github Skills (11)
nextflow8
spectra5
tricks4
mutation4
commons3
genomics3
portal3
bioinformatics2
sevenbridges2
data-files1
sequencing1
Programming languages (5)
Github contributions (5)
IARCbioinfo/PVAmpliconFinder
Jul 2019 - Aug 2020
Contributions:2 PRs, 24 pushes, 2 branches in 1 year 1 month
SixEl27/Voyageur_Commerce
Mar 2015 - May 2015
Contributions:37 pushes in 1 month
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