Aliz Raksi
Staff Bioinformatics Scientist
San Diego, California, United States
Summary
👤
Senior🎓
Top SchoolAliz Raksi is a Staff Bioinformatics Scientist with a decade of experience turning high-throughput sequencing and multi-omics data into actionable insights for clinical and research settings. She has deep expertise in NGS, optical genome mapping, variant interpretation, and biomarker discovery, and has built and validated production pipelines for clinical sequencing at scale. Comfortable from low-level C++ to high-productivity Python/R workflows, she pairs strong statistical and machine-learning skills (Bayesian inference, MCMC, PCA) with cloud and HPC production experience (AWS, DNAnexus, SGE, Docker). Her work spans discovery—exome and genome mining for complex disease genetics—to clinical translation, including neoantigen discovery and GLP/CLIA-aligned sequencing workflows. A marathon finisher and world traveler, she brings persistence and cross-disciplinary communication to teams that bridge biology, software engineering, and clinical impact.
10 years of coding experience
10 years of employment as a software developer
University of California, Los Angeles
Hungarian
Stackoverflow
161reputation
103kreached
1answer
0questions
Github Skills (37)
sequencing9
querying9
genomics8
screen-scraping8
bioinformatics8
depth7
viewer7
genome7
cocoa-touch6
calculation6
uitableview6
api6
iphone6
scraper6
coverage6
Programming languages (8)
Github contributions (5)
alizraksi/sorva
Aug 2016 - Mar 2018
Contributions:27 commits, 2 PRs, 23 pushes in 1 year 6 months
stand-alonequeryingstandngsgenomics
alizraksi/DepthOfCoveragePerInterval
Sep 2016 - Jan 2017
Contributions:16 commits, 15 pushes, 1 branch in 4 months
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