Allie Warren
Epidemiologist II at Washington State Department of Health
Seattle, Washington, United States
Summary
👤
Senior🎓
Top SchoolAllie Warren is an epidemiologist and data scientist with eight years of experience building automated, cloud-native workflows and robust validation and visualization pipelines to support disease surveillance at the Washington State Department of Health. She combines a strong computational biology background from the Broad Institute and Carleton College with practical public health impact, translating single-cell and genomic modeling experience into operational surveillance systems. Known for turning complex data into actionable insights, she applies statistical methods and scalable automation to improve health outcomes and enable data-driven decision making across public health teams. Based in Seattle, she brings both research rigor and hands-on engineering skills to productionize analytic pipelines that elevate routine surveillance work.
8 years of coding experience
4 years of employment as a software developer
Bachelor’s Degree, Computer Science, 3.766, Bachelor’s Degree, Computer Science, 3.766 at Carleton College
English
Github Skills (5)
rna-seq8
genomics7
bayesian4
polymorphism3
multiplexing2
Programming languages (3)
Github contributions (5)
broadinstitute/Celligner_ms
Feb 2020 - Oct 2020
Code related to the Celligner manuscript
Contributions:2 releases, 32 commits, 21 pushes in 7 months
broadinstitute/single_cell_classification
Nov 2019 - Apr 2020
Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles
Contributions:11 commits, 5 pushes in 5 months
rna-seq
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