Alon Oyler-yaniv - Lecturer, Principal Investigator

Alon Oyler-yaniv

Lecturer, Principal Investigator

Boston, Massachusetts, United States

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Summary

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Senior

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Top School

Alon Oyler-yaniv is a biophysicist and systems biologist with nine years of interdisciplinary experience building optical instruments, quantitative imaging pipelines, and computational analysis for immunology and tissue-scale biology. As a Lecturer and Principal Investigator at Harvard Medical School he integrates light-sheet microscopy, custom instrumentation and software (C++, Python, MATLAB) to reveal host–pathogen and wound-healing dynamics in intact tissues. His background spans hands-on biophysics—optical trapping, AFM, flow cytometry—and in vivo immune assays, enabling a rare combination of experimental rigor and computational modeling. He has a Ph.D. in Physics and a track record of translating physical principles (e.g., cytokine–membrane interactions, spatial cell‑cell signaling) into scalable imaging and analysis frameworks. Colleagues rely on him to bridge optics, data science, and immunology to ask and answer questions that single-discipline teams often miss.

9 years of coding experience

2 years of employment as a software developer

Doctor of Philosophy (Ph.D.), Physics, Doctor of Philosophy (Ph.D.), Physics at Ben Gurion University

Ms.C., Physics, Ms.C., Physics at Ben-Gurion University of the Negev

Github Skills (20)

segmentation7

image-viewer6

spim6

python6

visualization6

algorithm5

datasets4

graphical-user-interface4

type-annotations3

stochastic3

numpy3

widgets2

microscopy2

spatial2

spread1

Programming languages (5)

JavaC++Jupyter NotebookMATLABPython

Github contributions (5)

oylab/oyLabImaging

Sep 2020 - Jan 2023

Code for analysis and organization of microscopy data

Contributions:1 review, 106 commits, 6 PRs in 2 years 4 months

alonyan/DIP

Oct 2019 - Apr 2022

Contributions:21 commits, 36 pushes, 1 branch in 2 years 6 months

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