Andre Barbosa
HPC Scientific Software Engineer at The Johns Hopkins University
Baltimore, Maryland, United States
Summary
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Senior🎓
Top SchoolAndre Barbosa is an HPC scientific software engineer with 13 years of experience combining bioinformatics, neuroscience, and deep learning to study neurodevelopmental disorders. Based in Baltimore, he brings an academic grounding from a PhD in Bioinformatics (Universidade de São Paulo) and extended research training at Johns Hopkins School of Medicine, applying scalable computing and data analysis to complex brain datasets. His recent roles span postdoctoral bioinformatics work at the Lieber Institute to technical leadership as an HPC engineer at Johns Hopkins, blending hands-on code, pipeline optimization, and model development. Known for translating high-dimensional biological data into interpretable results, he excels at bridging computational rigor with domain biology to accelerate discovery.
13 years of coding experience
2 years of employment as a software developer
Visiting Scientist, Neuroscience and Bioinformatics, Visiting Scientist, Neuroscience and Bioinformatics at The Johns Hopkins University School of MedicineMaster's degree, Genetics, Master's degree, Genetics at UEL - Universidade Estadual de LondrinaUniversity of São PauloFederal University of Technology – Paraná
Github Skills (47)
r-package10
data-science10
statistics10
r-stats10
data-wrangling10
r-programming10
big-data9
bioconductor9
rna-seq8
junction8
r7
spatial-transcriptomics7
illumina6
sequence6
mapreduce6
Programming languages (5)
Github contributions (5)
andrewejaffe/StemCellSVA
Feb 2013 - Aug 2016
Contributions:9 commits, 2 pushes in 3 years 6 months
SISBID/Data-Wrangling
Jul 2016 - Jul 2020
Teaching material for Summer Institute in Statistics for Big Data Module 1.
Contributions:1 release, 225 commits, 1 PR in 4 years 1 month
big-datastatisticsdata-sciencedata-wranglingr-programming
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