Andre Barbosa
HPC Scientific Software Engineer at The Johns Hopkins University
Baltimore, Maryland, United States
Summary
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Senior🎓
Top SchoolAndre Barbosa is an HPC scientific software engineer with 13 years of experience combining bioinformatics, neuroscience, and deep learning to study neurodevelopmental disorders. Based in Baltimore, he brings an academic grounding from a PhD in Bioinformatics (Universidade de São Paulo) and extended research training at Johns Hopkins School of Medicine, applying scalable computing and data analysis to complex brain datasets. His recent roles span postdoctoral bioinformatics work at the Lieber Institute to technical leadership as an HPC engineer at Johns Hopkins, blending hands-on code, pipeline optimization, and model development. Known for translating high-dimensional biological data into interpretable results, he excels at bridging computational rigor with domain biology to accelerate discovery.
13 years of coding experience
2 years of employment as a software developer
Visiting Scientist, Neuroscience and Bioinformatics, Visiting Scientist, Neuroscience and Bioinformatics at The Johns Hopkins University School of MedicineMaster's degree, Genetics, Master's degree, Genetics at UEL - Universidade Estadual de LondrinaUniversity of São PauloFederal University of Technology – Paraná
Github Skills (47)
r-package10
r-stats10
data-wrangling10
r-programming10
data-science9
machine-learning9
statistics9
seq9
rna-seq8
differential-expression8
junction8
bioconductor8
big-data8
bioinformatics7
transcriptomics7
Programming languages (4)
Github contributions (5)
andrewejaffe/andrewejaffe.github.io
Feb 2015 - Jul 2022
Contributions:106 pushes in 7 years 5 months
andrewejaffe/StemCellSVA
Feb 2013 - Aug 2016
Contributions:9 commits, 2 pushes in 3 years 6 months
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