Andrea Bagnacani
Bioinformatician
Berlin, Germany
Summary
🤩
Rockstar🎓
Top SchoolAndrea Bagnacani is a bioinformatician and backend-focused software developer with 11 years of experience building reproducible, automated data pipelines and usable digital archives. Based in Berlin, he bridges computer science and bioinformatics with a track record spanning academia (PhD research), industry roles at CENTOGENE, and his current position at varvis®, where he emphasizes neat, reusable, and reliable tooling for contributors and adopters. He has taught and published research, and complements his formal bioinformatics training with Data Science/AI practice from Le Wagon. Andrea is passionate about automation and data agency—turning complex biological datasets into auditable, decision-ready systems—and he treats reproducibility as a first-class product requirement. A practical polyglot, he focuses on backend reliability and developer experience, often designing solutions that reduce manual intervention and scale collaboration across teams.
10 years of coding experience
7 years of employment as a software developer
Data Science and AI, Data Science and AI at Le WagonMaster's degree, Bioinformatics, Master's degree, Bioinformatics at Alma Mater Studiorum – Università di BolognaSystems Biology and Bioinformatics, Systems Biology and Bioinformatics at Universität Rostock
Italian, English, German
Stackoverflow
1reputation
0reached
0answers
0questions
Github Skills (43)
docker10
python10
data-science10
seq10
workflow-engine10
chip-seq10
sequencing10
pipeline10
bioinformatics10
galaxy10
genomics10
science10
metagenomics10
posters9
workbench9
Programming languages (9)
Github contributions (5)
destairdenbi/galaxy-workflows
May 2017 - May 2020
de.STAIR Galaxy workflows created using the Galaxy workflow generator
Contributions:60 PRs, 31 pushes, 4 branches in 3 years
workflowsgalaxy-workflowsgalaxyworkflow
bgruening/galaxy-rna-workbench
Dec 2016 - Jan 2019
Galaxy RNA workbench
Contributions:41 commits, 15 PRs, 22 comments in 2 years 1 month
bioinformaticsrnagalaxyworkbench
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