Andreas Kähäri

System Developer at NBIS -- National Bioinformatics Infrastructure Sweden

Greater Uppsala Metropolitan Area Sweden
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Summary

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Senior
Andreas Kähäri is a Unix-focused system developer and bioinformatician with over a decade of experience building and maintaining software for major bioinformatics organizations, including the Wellcome Trust Sanger Institute and EMBL-EBI. He specializes in Perl APIs and database access patterns for genomic annotation resources, combining strong foundations in computer science and applied mathematics with practical implementation knowledge of language and protocol standards. Based in Uppsala, Sweden, he supports biomedical research infrastructure at NBIS while contributing actively to the Unix & Linux community online. Colleagues know him for candid, transformative mentorship and an unusual side talent: teaching meditation upon request. He also pursues photography, bringing an observant, detail-oriented perspective to both code and images.
code10 years of coding experience
job11 years of employment as a software developer
languagesEnglish, Swedish
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Stackoverflow

Stats
15,270reputation
3.1mreached
398answers
5questions
Badges
unix
top-5%
shell
top-1%
linux
top-1%
sed
top-5%
regex
top-5%
bash
top-1%
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Github Skills (111)

toolbox10
bash10
linuxbrew10
backup10
linter10
haskell10
bayesian-inference10
static-analysis10
linux10
shell10
developer-tools10
go10
angularjs10
deduplication10
shellcheck10

Programming languages (16)

JavaCSSC++RustCVueGoNextflow

Github contributions (5)

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andkaha/shell-toolbox

Feb 2017 - Jul 2022

Useful shell scripts for /bin/sh
Contributions:6 releases, 398 commits, 2 PRs in 5 years 5 months
shellshell-scriptstoolboxposix-sh
NBISweden/bacmet

Mar 2025 - Jan 2026

Contributions:16 reviews, 19 PRs, 58 pushes in 10 months
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