Andrey Ptitsyn

Gentleman Scientist at Northeastern University College of Science

Revere, Massachusetts, United States
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Summary

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Andrey Ptitsyn is an accomplished bioinformatics and computational genomics leader with 25+ years of experience building research programs, HPC infrastructure, and analytical pipelines for academic, clinical and commercial projects. He has led national-scale genome initiatives, designed cluster and cloud architectures for population sequencing, and translated genomic AI/ML into diagnostic and engineering workflows as Head of AI and CSO roles. A hands-on scientist and inventor, he discovered novel molecular mechanisms in cellular chronobiology, developed whole-genome composition and super-scaffolding algorithms, and doubled IP portfolios through patentable innovations. Comfortable from low-level algorithms to high-throughput cloud systems, he has a track record of mentoring researchers, securing funding, and turning complex multi-modal data into actionable insight. He mixes deep academic rigor (PhD in Bioinformatics) with practical startup and consulting impact, including sequencing and annotating new genomes such as Aplysia and Homarus. Based in Revere, MA, he continues independent research and teaching while consulting on translational genomics and AI-driven biomarker platforms.
code11 years of coding experience
job29 years of employment as a software developer
bookBachelor of Science - BS Biology, Bachelor of Science - BS Biology at State University of Nizhni Novgorod named after N.I. Lobachevsky (UNN)
bookM.Sci. Biology/Math.Biology, M.Sci. Biology/Math.Biology at Novosibirsk State University (NSU)
bookPh.D. Bioinformatics, Ph.D. Bioinformatics at University of the Western Cape
languagesRussian, Italian
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Github Skills (8)

django6
python5
yandex5
eve-online4
api-requests4
api3
python-api2
webdav1

Programming languages (1)

Python

Github contributions (5)

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MyBook/appmetrica

Dec 2017 - Oct 2021

Application for integrating with Yandex AppMetrica (unofficial)
Contributions:5 reviews, 10 PRs, 39 pushes in 3 years 10 months
appmetricaintegratingyandex-appmetricayandex
MyBook/django-atol

Nov 2017 - Apr 2019

Integration of Django and http://online.atol.ru/
Contributions:3 releases, 3 reviews, 15 commits in 1 year 4 months
djangoatol-onlinepythonatol
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Andrey Ptitsyn - Gentleman Scientist at Northeastern University College of Science