Anna Zhukova

Group Leader at Ecole normale supérieure

Paris, Ile-de-France
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Summary

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Senior
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Top School
Anna Zhukova is a group leader and computational biologist with 15 years of experience applying algorithmic and mathematical methods to understand pathogen transmission and evolution. Based in Paris, she develops novel phylogenetic methods, tools and mathematical models to answer practical epidemiological questions—from tracing SARS-CoV-2 introductions to quantifying onward transmission of drug-resistant HIV-1 and the impact of sanitation on cholera. Her background spans academic research and engineering roles at Institut Pasteur and ENS, combining a PhD in computer science with hands-on software development in bioinformatics and simulation tools. Known for bridging theory and application, she brings rigorous modeling and software craftsmanship to public-health genomics, often turning complex sequence data into actionable insights for outbreak investigation.
code15 years of coding experience
job15 years of employment as a software developer
bookComputer Software Engineering, Computer Software Engineering at Google Tech Industry Coaching Program
bookHigh School Diploma, Physics and Mathematics, High School Diploma, Physics and Mathematics at Saint Petersburg Lyceum 239
bookSpecialist (equiv. to BSc+MSc), Computer Software Engineering, Specialist (equiv. to BSc+MSc), Computer Software Engineering at Saint Petersburg State University
bookComputer Software Engineering, Computer Software Engineering at Academy of Modern Software Engineering
bookDoctor of Philosophy (PhD), Computer Science, Doctor of Philosophy (PhD), Computer Science at Université Bordeaux I
languagesEnglish, French, Russian
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Github Skills (54)

simulation10
ancestor10
evolutionary10
package-management10
ontology10
conda10
combine10
phylogenetics10
phylogenetic-trees10
bioinformatics10
systems-biology10
owl10
computational-biology10
modeling10
deep-learning9

Programming languages (7)

DockerfileShellCSSC++HTMLJupyter NotebookPython

Github contributions (5)

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evolbioinfo/phylocovid

Jul 2020 - Apr 2022

Contributions:13 commits in 1 year 9 months
annazhukova/mod_sbml

Jan 2015 - Apr 2017

Contributions:2 releases, 104 commits, 55 pushes in 2 years 3 months
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Anna Zhukova - Group Leader at Ecole normale supérieure