Aswathy Sebastian
Bioinformatics Data Scientist
State College, Pennsylvania, United States
Summary
👤
Senior🎓
Top SchoolAswathy Sebastian is a Bioinformatics Data Scientist with over a decade of hands-on experience delivering end-to-end analysis of high-throughput sequencing projects, from raw reads to statistical interpretation and publication-ready figures. Based at Penn State and pursuing a PhD in Bioinformatics, she builds reproducible, scalable workflows in Python, R and Bash for RNA-seq, ATAC-seq, CUT&Tag, TT-seq, ribosome profiling, genome assembly, and variant calling. Her career spans plant and protein genomics to large-scale transcriptomic studies, giving her a knack for translating diverse experimental questions into robust computational solutions. She routinely collaborates with faculty and trainees, contributes methods and results to grants and peer-reviewed papers, and provides training on data analysis best practices. Notably, she combines deep domain expertise with practical data management at a university sequencing core, ensuring analyses remain reproducible and production-ready.
11 years of coding experience
1 year of employment as a software developer
Bachelor of Science Computational Science, Bachelor of Science Computational Science at Mahatma Gandhi UniversityDoctor of Philosophy - PhD Bioinformatics, Doctor of Philosophy - PhD Bioinformatics at Penn State UniversityMaster of Science Bioinformatics, Master of Science Bioinformatics at Georgia Institute of TechnologyMaster of Science Bioinformatics, Master of Science Bioinformatics at Madras University
Github Skills (52)
genomes10
bioinformatics10
genomics10
prediction8
sequence8
assembler8
molecule8
gene-expression7
pipeline7
seq6
viewer6
dna-sequences5
rna-seq5
tree-structure5
django5
Programming languages (8)
Github contributions (5)
aswathyseb/biostar-recipes
Apr 2018 - Dec 2018
Tools, Pipelines for the Biostar Engine
Contributions:57 pushes in 7 months
sarifpipelinecondabioinformaticspipelines
aswathyseb/marker_database
Mar 2023 - Aug 2023
Contributions:56 pushes in 5 months
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