Austin Varela

PhD Student at Weill Cornell Graduate School of Medical Sciences

New York, New York, United States
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Summary

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Austin Varela is a computational biologist and PhD student with 12 years of experience developing methods to dissect cellular heterogeneity, currently conducting single-cell cancer transcriptomics research at Weill Cornell Medicine and Memorial Sloan Kettering. He blends rigorous academic training (BS in Computational Biology and Data Science, MS and PhD work in Computational Biology & Medicine) with applied tool-building, having led the popular Discord4J open-source project for nearly a decade. Austin’s work spans machine learning for dimensionality reduction (including deep autoencoders for metabolomics) and evolutionary-rate approaches to identify clinically relevant interactions, showing comfort across algorithm development and large biological datasets. Based in New York, he also contributes as a graduate teaching assistant, translating complex dynamic models in biology into practical learning for students.
code12 years of coding experience
job6 years of employment as a software developer
bookHigh School Diploma, Advanced Regents Diploma With Honors Distinction, High School Diploma, Advanced Regents Diploma With Honors Distinction at Eleanor Roosevelt High School
bookBachelor of Science - BS, Computational Biology, Bachelor of Science - BS, Computational Biology at University of Rochester
bookDoctor of Philosophy - PhD, Computational Biology & Medicine, Doctor of Philosophy - PhD, Computational Biology & Medicine at Weill Cornell Graduate School of Medical Sciences
languagesEnglish, Portuguese
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Stackoverflow

Stats
79reputation
5kreached
0answers
3questions
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Github Skills (200)

minecraft10
programming-language10
blast10
probabilistic-programming10
python10
windows10
maven-plugin10
bots10
websocket10
forge10
uniprot10
kotlin-library10
density-estimation10
deep-learning10
gpu10

Programming languages (14)

JavaC++CTeXVueHTMLJupyter NotebookKotlin

Github contributions (5)

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austinv11/Servicer

Oct 2018 - Jun 2020

A simple annotation processor for wiring Java services
Contributions:3 releases, 1 PR, 13 pushes in 1 year 8 months
java-agentjava-servicesannotation-processorwiringjax-rs
Discord4J/Dockerfiles

Jun 2018 - May 2020

The collection of scripts used to manage our server
Contributions:60 commits, 1 PR, 52 pushes in 1 year 11 months
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Austin Varela - PhD Student at Weill Cornell Graduate School of Medical Sciences