Ben Shababo

Forward Deployed ML Engineer at Modal

Berkeley, California, United States
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Summary

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Ben Shababo is a Forward Deployed ML Engineer in Berkeley with 14 years of experience applying statistics, machine learning, and computational neuroscience to build end-to-end experimental and production systems. He pairs a PhD in Neuroscience and Statistics from UC Berkeley with hands-on expertise in photonics, two-photon holographic optogenetics, and rapid prototyping to deliver integrated hardware-software solutions for biotech and academic labs. His career spans research and product roles—from building multiphoton microscopy systems at 3i to developing transformer-based image models for longevity research—plus consulting on automation, data management, and experimental design. Ben’s background in film and technical direction informs a practical, design-forward approach to complex tooling and visualization, and he often bridges wet-lab needs with scalable ML deployments. Known for translating novel scientific methods into robust pipelines, he thrives where neuroscience, optics, and machine learning intersect.
code14 years of coding experience
job9 years of employment as a software developer
bookDoctor of Philosophy - PhD Neuroscience and Statistics, Doctor of Philosophy - PhD Neuroscience and Statistics at University of California, Berkeley
bookFilm & Media Arts, Film & Media Arts at Temple University
bookBachelor of Science - BS Neuroscience & Behavior Computer Science Statistics, Bachelor of Science - BS Neuroscience & Behavior Computer Science Statistics at Columbia University
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Github Skills (55)

pytorch10
python10
machine-learning10
stable-diffusion10
java10
gpu10
serverless10
ui-components9
client-library9
bayesian9
python-client9
audio9
nlp8
data-visualization8
data-analysis8

Programming languages (4)

TypeScriptC++MATLABPython

Github contributions (5)

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shababo/psc-detection

Jul 2015 - Jun 2019

Contributions:226 pushes, 1 branch in 3 years 11 months
tracesclampgibbsapproachgibbs-sampling
shababo/psc-detection-dist

Jul 2015 - Jul 2016

Distribution of code implementing the Bayesian PSC detection algorithm described in Merel et al, J. Neuro. Meths., 2016.
Contributions:255 commits, 1 PR, 13 pushes in 1 year
bayesian
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