Benjamin Hume

Director, Computational Biology

Cambridge, England, United Kingdom
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Summary

👤
Senior
🎓
Top School
Benjamin Hume is Director of Computational Biology at CS Genetics with a decade of experience building bioinformatics pipelines, data infrastructure, and customer-facing tools to make single-cell RNA sequencing more accessible and scalable. He combines hands-on pipeline development and automation with strategic oversight, guiding assay development, product decisions, and cross-functional data-driven experiments. His background spans academia and field science—from leading SymPortal analytics for coral symbiont genotyping and participating in the Tara Pacific expedition to managing multi-institution bioinformatics projects—bringing a rare mix of ecological genomics insight and production informatics. Based in Cambridge, he excels at turning complex experimental questions into robust, reproducible analysis systems that serve both R&D and commercial customers.
code11 years of coding experience
job4 years of employment as a software developer
bookDoctor of Philosophy - PhD, Molecular Biology, Doctor of Philosophy - PhD, Molecular Biology at University of Southampton
bookMaster's degree, Aquatic Biology and Resource Management, Master's degree, Aquatic Biology and Resource Management at University of Exeter
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Github Skills (58)

mothur10
rna-seq10
illumina10
sequencing9
bioinformatics9
phyloseq8
heat8
nextflow8
bioinformatics-analysis8
taxonomy7
microbiology7
docker-image7
blast7
figure7
bioconductor7

Programming languages (11)

JavaDockerfileC++RShellCJavaScriptNextflow

Github contributions (5)

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didillysquat/reefMapMaker

Dec 2020 - Jul 2022

Contributions:6 releases, 76 commits, 2 PRs in 1 year 7 months
Bioinformatic pipeline for processing CS Genetics' scRNA-Seq kit-generated sequencing data
Contributions:35 releases, 14 reviews, 67 PRs in 3 years 1 month
sequencing
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