Benjamin Siranosian
Member Of Technical Staff at Radical Numerics
Palo Alto, California, United States
Summary
👤
Senior🎓
Top SchoolBenjamin Siranosian is a computational biologist and bioinformatics leader with 11 years of experience turning complex sequencing data into actionable biology and products. He built scalable cloud-native pipelines (Nextflow/AWS Batch) to extract methylation, genetic variation, and microbiome signals from single experiments and has led small cross-functional teams to productionize those workflows for consumer and research applications. His PhD work at Stanford revealed novel routes of microbiome transmission by resolving strains across thousands of metagenomes, and he has translated that precision into roles leading bioinformatics at startups and biotech. Based in Palo Alto, he combines hands-on pipeline engineering, CRO/sample management, and algorithm development with an entrepreneurial drive to make computational biology tools broadly accessible. An under-the-radar strength is his track record of adapting research-grade metagenomics methods into robust, scalable systems for commercial use.
11 years of coding experience
7 years of employment as a software developer
Bachelor of Science (BS) Computational Biology, Bachelor of Science (BS) Computational Biology at Brown UniversityAquincum Institute of Technology, Budapest, HungaryDoctor of Philosophy - PhD Genetics, Doctor of Philosophy - PhD Genetics at Stanford University
Stackoverflow
1reputation
0reached
0answers
0questions
Github Skills (103)
package-management10
forge10
genomes10
microbiome10
nf-core10
reproducible-science10
ncbi10
nextflow10
classification10
conda10
metagenomics10
reproducible-research10
sbml10
bioinformatics10
illumina10
Programming languages (13)
Github contributions (5)
bsiranosian/modules
Nov 2022 - Dec 2023
Repository to host tool-specific module files for the Nextflow DSL2 community!
Contributions:58 pushes, 7 branches in 1 year
hostnextflow-dsl2nextflowdsl2workflow
bsiranosian/openmm-dna
Mar 2018 - Feb 2019
Contributions:9 commits, 8 pushes, 1 branch in 11 months
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