Bhavya Papudeshi
Research Associate
Lausanne, Vaud, Switzerland
Summary
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Senior🎓
Top SchoolBhavya Papudeshi is a research-focused bioinformatician with eight years of experience decoding bacterial, bacteriophage, and metagenomic sequence data to reveal host interactions, specificity, and evolutionary dynamics. Currently a Research Associate at the University of Lausanne and PhD candidate in Bioinformatics, she builds and optimizes reproducible analysis pipelines that turn raw sequencing reads into actionable biological insights. Her background spans academic teaching and applied genome analysis support, giving her a practical edge in translating complex methods for diverse research teams. Based in Lausanne, she combines wet-lab-informed intuition from a biotechnology BTech with advanced computational training, enabling efficient integration of evolutionary theory and pipeline engineering.
8 years of coding experience
Semester Abroad Program, Project/Undergraduate Thesis Work, Semester Abroad Program, Project/Undergraduate Thesis Work at Guangdong University of TechnologyBachelor of Technology (BTech), Biotechnology, Bachelor of Technology (BTech), Biotechnology at Vellore Institute of TechnologySan Diego State UniversityDoctor of Philosophy - PhD, Bioinformatics, Doctor of Philosophy - PhD, Bioinformatics at Flinders University
Stackoverflow
1reputation
0reached
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Github Skills (61)
virus10
package-management10
conda10
bioinformatics10
kraken9
datasets9
genomes9
seq9
discovery9
bioconda9
genome8
genomics8
prediction8
rna-seq8
pathogen8
Programming languages (8)
Github contributions (5)
npbhavya/bacterial-genome-assembly
Aug 2020 - May 2024
Contributions:2 releases, 91 pushes, 2 branches in 3 years 8 months
NCGAS/Metagenomics-Workshop-Spring-2020
Jan 2020 - Mar 2020
Contributions:2 releases, 33 commits, 32 pushes in 2 months
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