Boris Muzellec

Senior Research Scientist at Google DeepMind

France
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Summary

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Senior
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Top School
Boris Muzellec is a senior research scientist with 11 years of experience at the intersection of machine learning and computational biology, currently applying AI for health at Google DeepMind after leading research efforts at Owkin. He has a strong theoretical foundation from École Polytechnique and a PhD from ENSAE Paris, and his work spans kernel methods, optimal transport, and federated differential expression analysis (FedPyDESeq2) as well as the open-source PyDESeq2 package. Boris blends deep academic research—postdoc work on kernel sums-of-squares and Gradient Langevin dynamics—with practical impact in healthcare ML, including agentic LLM prototypes for knowledge extraction. Fluent in both research and engineering, he has a track record of shipping libraries and translating advanced math into usable tools for biomedical data. An atypical background as a former naval navigation officer underscores his operational discipline and ability to perform under pressure.
code11 years of coding experience
job4 years of employment as a software developer
bookDoctor of Philosophy - PhD, Mathématiques appliquées, Doctor of Philosophy - PhD, Mathématiques appliquées at ENSAE Paris
bookComputer Science, Applied Mathematics, Computer Science, Applied Mathematics at École Polytechnique
bookClasses préparatoires MPSI-MP* (Mathématics, Physics, Computer Science), Classes préparatoires MPSI-MP* (Mathématics, Physics, Computer Science) at Lycée Joffre
bookMaster of Science (MSc), Data Science, Master of Science (MSc), Data Science at Université Paris-Saclay
languagesFrench, English, Spanish
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Github Skills (24)

python10
seq10
leaderboard10
transcriptomics10
pipeline10
rna-seq10
bioinformatics10
differential-expression10
silo9
differential-privacy9
data-privacy9
fairness-ml8
federated-learning8
machine-learning8
datasets8

Programming languages (3)

ShellJavaScriptPython

Github contributions (5)

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owkin/PyDESeq2

Nov 2022 - Mar 2023

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
Contributions:19 releases, 230 reviews, 151 commits in 3 months
pythonpipelinepython-implementationbulk-rna-seqdea
BorisMuzellec/MissingDataOT

Feb 2020 - May 2021

Contributions:12 commits, 22 pushes, 4 branches in 1 year 3 months
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Boris Muzellec - Senior Research Scientist at Google DeepMind