Brett Barbaro

Instructor at UC San Diego Extension

San Diego, California, United States
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Summary

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Senior
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Top School
Brett Barbaro is an interdisciplinary scientist and educator in San Diego who builds atomic-resolution, interactive computer models of cell-scale biological systems and translates them into research, teaching, and physical 3D prints. With a PhD in neuroscience and roughly nine years postdoctoral and research experience at institutions like The Scripps Research Institute and UC Irvine, he leads projects on pancreatic beta cells and minimal-genome organisms in collaboration with USC, UCSD, and the J. Craig Venter Institute. He also teaches Introduction to Biochemistry at UCSD Extension, using classroom time to refine visualization and modeling approaches born from his lab work. Beyond academia he consults on science communication for film and public exhibits—work that ranges from advising on Divergent to designing 3D displays for “Al’s Brain in 3-D.” His blend of computational modeling, wet-lab background, and hands-on fabrication makes him adept at turning complex molecular biology into engaging, tangible experiences.
code9 years of coding experience
job6 years of employment as a software developer
bookBA, Biochemistry, BA, Biochemistry at Harvard University
bookDoctor of Philosophy (Ph.D.), Biological Science/Neuroscience, Doctor of Philosophy (Ph.D.), Biological Science/Neuroscience at University of California, Irvine
languagesSpanish, Italian, Japanese, English
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Github Skills (9)

mining6
csv5
recipe3
databases3
database3
pdb2
python2
pdb-files2
json2

Programming languages (1)

Python

Github contributions (5)

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brettbarbaro/csvcomplete

Aug 2016 - Jul 2019

completes info from model .csv by mining online databases
Contributions:1 PR, 11 pushes, 1 branch in 3 years
csvminingdatabasedatabases
brettbarbaro/CSVtoRECIPE

Jul 2016 - Sep 2017

Contributions:4 PRs, 26 pushes, 5 branches in 1 year 2 months
csvpythonrecipepdbpdb-files
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Brett Barbaro - Instructor at UC San Diego Extension