Brett Olsen
Minneapolis, Minnesota, United States
Summary
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RockstarBrett Olsen is a Staff Computational Biologist with 11 years of experience bridging academic biophysics and industrial bioinformatics to deliver production-grade single-cell and clinical sequencing pipelines. At 10x Genomics he led major CellRanger developments for GEM-X, scATAC, and joint scATAC/GEX products, and previously automated and improved clinical variant pipelines at Invitae, cutting manual review and confirmation workloads dramatically. Trained as a PhD molecular and cellular biologist with deep expertise in molecular dynamics and membrane biophysics, he pairs rigorous computational modeling and experimental validation with practical tooling and pipeline engineering. He’s comfortable moving between algorithm development, QC metric design, and shipping robust software for high-throughput assays, and has a track record of turning complex biological problems into scalable analyses. Based in the San Francisco Bay Area, he also has a history of teaching and open-source tooling for scientific analysis, reflecting a knack for clear technical communication and reproducible research.
11 years of coding experience
Github Skills (16)
line-by-line10
statistics10
machine-learning10
azerothcore10
unreal10
python10
data-science10
profiling10
survival10
data-analysis10
scikit-learn9
trinitycore9
gatk6
unwrapping3
capacity2
Programming languages (4)
Github contributions (5)
caethan/ribomethseq
Mar 2017 - Apr 2019
Contributions:1 release, 18 pushes, 1 branch in 2 years 1 month
caethan/urw-sufficiency
Nov 2016 - Oct 2021
UnReal World self-sufficiency mod
Contributions:1 release, 129 commits, 18 PRs in 5 years
unreal
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