Brian Munsky

Associate Professor

Fort Collins, Colorado, United States
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Summary

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Senior
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Top School
Brian Munsky is an Associate Professor of Chemical, Biological, and Biomedical Engineering with a decade of experience applying stochastic modeling, statistical inference, and experiment design to extract predictive insight from single-cell and single-molecule data. He builds and validates quantitative models of gene regulation that turn cellular “noise” from a nuisance into an information-rich fingerprint of underlying mechanisms, combining Bayesian and machine-learning approaches with computer-aided experiment design. His work spans bacteria to mammalian systems and scales from single mRNA molecules to complex microbial communities, and grew from a background in mechanical and aerospace engineering including a PhD from UC Santa Barbara. At Colorado State University he leads interdisciplinary teams and leverages theoretical tools developed during a distinguished postdoc at Los Alamos to make models experimentally actionable and predictive. An often-overlooked strength is his focus on designing experiments that maximize information per dollar, ensuring practical impact for both basic and synthetic biology.
code10 years of coding experience
job14 years of employment as a software developer
bookMS, Aerospace Engineering, MS, Aerospace Engineering at Penn State University
bookPhD, Mechanical Engineering, PhD, Mechanical Engineering at UC Santa Barbara
bookq-bio Summer School
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Github Skills (10)

markov-chain10
modeling9
parameter-estimation9
stochastic-processes9
matlab9
experimental-design8
bayesian-inference8
sequence1
simulator1
bioinformatics1

Programming languages (2)

Jupyter NotebookMATLAB

Github contributions (5)

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MunskyGroup/uqbio2022

May 2022 - Jun 2022

Contributions:29 commits, 19 pushes in 1 month
Munsky/qbio-Textbook

Apr 2016 - Nov 2017

Contributions:5 commits, 4 pushes, 1 branch in 1 year 7 months
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Brian Munsky - Associate Professor