Carlos Marcos
Ingeniero Sénior at Universitetet i Bergen (UiB)
Bergen, Vestland, Norway
Summary
👤
Senior🎓
Top SchoolCarlos Marcos is a senior software engineer with 10 years of experience applying full-stack and bioinformatics engineering to academic and research environments. Currently at the University of Bergen he contributes to mass spectrometry tools like PeptideShaker and SearchGUI and their integration with Galaxy, while previously architecting standardized APIs and BioJS components for genotype–phenotype analysis at the Earlham Institute. He has strong hands-on experience packaging bioinformatics software for Bioconda—updating major tools and adding new recipes such as PathwayMatcher—and a background in enterprise Java/Grails systems from earlier roles. Carlos combines research-oriented development with community-facing projects, having coordinated technical efforts for GOBLET’s training portal and collaborated with ELIXIR. He also brings an unusual mix of distributed systems training and formal music study, reflecting disciplined attention to both technical detail and creative practice. Based in Bergen, he excels at turning complex domain requirements into robust, reusable tools for the life-sciences community.
10 years of coding experience
7 years of employment as a software developer
Intermediate Music Level, specializing in Piano, Music, B, Intermediate Music Level, specializing in Piano, Music, B at Conservatorio Profesional de Música AmanielIngeniería Informática, Especialidad Sistemas Distribuidos, Ingeniería Informática, Especialidad Sistemas Distribuidos at Universidad Carlos III
Spanish, English
Github Skills (9)
bioinformatics10
conda10
python10
package-management10
java9
bash9
javas9
dockers5
docker5
Programming languages (9)
Github contributions (5)
bioconda/bioconda-recipes
Dec 2017 - Jul 2021
Conda recipes for the bioconda channel.
Role in this project:
Back-end Developer
Back-end DeveloperContributions:4 reviews, 34 commits, 44 PRs in 3 years 7 months
Contributions summary:Carlos primarily contributed to updating and maintaining Conda recipes within the `bioconda-recipes` repository. Their work focused on updating existing packages like PeptideShaker and SearchGUI to newer versions. They also added a new recipe for PathwayMatcher, including the creation of build scripts and wrapper scripts. The user demonstrated skills in packaging and building software for bioinformatics tools.
recipescondabiocondabioinformaticspackage-management
BioCIDER/biojs-vis-context-data-unique-list
Nov 2015 - Apr 2017
Contributions:128 pushes, 1 branch in 1 year 5 months
eventsregistriesvisualisationdeep-learningelixir
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