Cédric Bouysset

Cheminformatics Research Scientist III

Oxford, England, United Kingdom
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Summary

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Cédric Bouysset is a cheminformatics research scientist with nine years’ experience applying molecular modeling, machine learning and software engineering to drug discovery and sensory science. He holds a PhD and has built end-to-end computational workflows and tools—such as ChemFlow and webservers for sweetness prediction—while contributing substantive interoperability improvements to the widely used MDAnalysis library to bridge it with RDKit. Based in Oxford, he has worked in both industry (Exscientia, Recursion) and academia, routinely combining molecular dynamics, docking, and ML-driven virtual screening to accelerate compound R&D. He’s comfortable shipping production-ready code and research software for clusters and web deployment, and his portfolio demonstrates a mix of scientific rigor and pragmatic engineering. An unexpected strength is his track record of enhancing toolchain interoperability, making specialized cheminformatics methods accessible across ecosystems.
code8 years of coding experience
job3 years of employment as a software developer
bookMaster, Chemoinformatique, Master, Chemoinformatique at Université de Strasbourg
bookBaccalauréat, S, Mention Bien, Baccalauréat, S, Mention Bien at Lycée Albert 1er
bookLicence, Chimie, Mention Bien, Licence, Chimie, Mention Bien at Université Nice Sophia Antipolis (membre d'Université Côte d'Azur)
languagesItalian, English, French
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Github Skills (10)

rdkit10
analyse10
computational-chemistry10
molecular-dynamics-simulation10
mdanalysis10
molecular-simulation10
python10
nonlinear-dynamics10
numpy9
testing8

Programming languages (8)

TypeScriptCSSC++TeXJavaScriptHTMLJupyter NotebookPython

Github contributions (5)

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MDAnalysis/mdanalysis

Mar 2020 - Apr 2022

MDAnalysis is a Python library to analyze molecular dynamics simulations.
Role in this project:
userBack-end Developer
Contributions:43 reviews, 17 commits, 22 PRs in 2 years
Contributions summary:Cédric focused on improving the MDAnalysis library, specifically by refactoring and enhancing its functionality related to molecular dynamics simulations. Their contributions include replacing deprecated code with modern alternatives, adding new features such as progress bars, and improving the RDKit interoperability. They also addressed bugs and incorporated new functionalities like SMARTS-based selections, enhancing the library's analysis capabilities.
molecular-dynamics-simulationmolecular-dynamics-simulationspython-librarypythonscience
cbouy/mols2grid

Mar 2021 - Dec 2022

Interactive molecule viewer for 2D structures
Contributions:14 releases, 196 commits, 28 PRs in 1 year 9 months
cheminformaticsrdkitpythonmolecule-viewermolecule
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