Chien-chi Lo
Research Technologist at Los Alamos National Laboratory
Los Alamos, New Mexico, United States
Summary
🤩
Rockstar🎓
Top SchoolChien-chi Lo is a research technologist at Los Alamos National Laboratory with 13 years of experience applying bioinformatics and computational methods to sequence assembly, mapping, and metagenomic analysis. He holds dual B.S. degrees in public health and medical technology, an M.S. in bioinformatics, and a second M.S. in computer science, blending wet-lab understanding with strong computational skills. His work has included developing hidden Markov models for viral alignment, Pyro-sequencing analysis, and biological database and web-interface development, demonstrating an ability to move projects from algorithm design to production workflows. Based in Los Alamos, he focuses on building reproducible workflows and data analysis pipelines that bridge experimental and in silico research. An underappreciated strength is his cross-disciplinary training, which lets him translate domain-specific biology needs into robust software solutions.
13 years of coding experience
2 years of employment as a software developer
Master of Science (M.S.), Bioinformatics, Master of Science (M.S.), Bioinformatics at National Yang Ming UniversityMaster of Science (M.S.), Computer Science, Master of Science (M.S.), Computer Science at The University of New Mexico
Chinese, English
Github Skills (78)
github10
package-management10
coverage10
genomes10
microbiome10
genomics10
next-generation-sequencing10
bioconda10
git10
genome10
conda10
sequencing10
barplot10
bioinformatics10
illumina10
Programming languages (13)
Github contributions (5)
microbiomedata/ReadsQC
May 2020 - Aug 2025
This workflow is a replicate of the QA protocol implemented at JGI for Illumina reads
Contributions:9 releases, 10 reviews, 9 PRs in 5 years 4 months
illumina
microbiomedata/WorkflowPlanning
Aug 2019 - Feb 2020
This is primarily a repo for capturing policies and discussions around the different workflows for NMDC. This is also used for project management related pieces.
Contributions:29 commits, 19 PRs, 9 pushes in 6 months
capturingpoliciesnmdcproject-managementworkflows
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