Christian Zmasek
Senior Bioinformatics Engineer
San Diego, California, United States
Summary
👤
Senior🎓
Top SchoolChristian Zmasek is a Senior Bioinformatics Engineer in San Diego with 11 years of focused experience applying computational methods to molecular and comparative biology problems. He combines a PhD in Molecular Genetics and a diploma from ETH Zürich to bridge experimental insight with robust bioinformatics software development. Since 2016 he has driven bioinformatics engineering at the J. Craig Venter Institute after roles at UC San Diego and a long postdoctoral tenure, consistently turning complex genomics data into usable tools and analyses. His background as a principal investigator and bench scientist gives him uncommon fluency in both algorithmic design and practical lab constraints. Known for long-term commitments to research organizations, he brings steady leadership in building reproducible pipelines and integrating evolutionary perspectives into software solutions. Colleagues rely on him for thoughtful, biology-first engineering that anticipates downstream experimental needs.
11 years of coding experience
10 years of employment as a software developer
Diploma, Chemistry/Biology with emphasis on Biochemistry, Molecular Biology/Biophysics, Cell Biology, Diploma, Chemistry/Biology with emphasis on Biochemistry, Molecular Biology/Biophysics, Cell Biology at Eidgenössische Technische Hochschule ZürichDoctor of Philosophy (Ph.D.), Molecular Genetics, Doctor of Philosophy (Ph.D.), Molecular Genetics at Washington University in St. Louis
German, English, French, Japanese
Github Skills (41)
visualization10
nmf10
evolutionary10
evolution10
phylogenetics10
phylogenetic-trees10
bioinformatics10
genomics10
biology9
javascript9
java9
nodejs9
cytoscapejs8
ruby8
cytoscape8
Programming languages (8)
Github contributions (5)
cmzmasek/archaeopteryx-js
Nov 2016 - Jan 2023
Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.
Contributions:30 releases, 75 commits, 3 PRs in 6 years 2 months
visualizationevolutionphylogeneticsphylogenetic-treesanalysis
cmzmasek/msa
Sep 2018 - Mar 2020
Modified Version of MSAViewer
Contributions:1 release, 1 PR, 11 pushes in 1 year 5 months
windowsmodified
Find and Hire Top DevelopersWe’ve analyzed the programming source code of over 60 million software developers on GitHub and scored them by 50,000 skills. Sign-up on Prog,AI to search for software developers.