Christopher Fonnesbeck

Principal Data Scientist

Nashville-Davidson, Tennessee, United States
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Summary

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Christopher Fonnesbeck is a principal data scientist and academic biostatistician with 11+ years applying Bayesian and hierarchical modeling to medicine, epidemiology, and sports analytics. He bridges rigorous research and production code—contributing substantive sampling and model-conditioning fixes to the core PyMC project and modernizing PyMC examples and tooling—while leading data science at PyMC Labs and teaching at Vanderbilt. His background spans quantitative ecology and statistics (PhD/MS) and a decade of applied work with MLB organizations, where decision analysis and sabermetrics informed real-world choices. Known for pragmatic statistical software improvements, he often surfaces subtle numerical fixes in probabilistic samplers that improve inference stability.
code11 years of coding experience
job17 years of employment as a software developer
bookUniversity of Georgia
bookM.S. Zoology, M.S. Zoology at The University of British Columbia
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Stackoverflow

Stats
4,173reputation
524kreached
89answers
33questions
Badges
python
top-5%
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Github Skills (38)

bayesian-statistics10
maintenance10
python10
multiple-selection10
feature-selection10
testing10
survival-analysis10
time-series10
distributions10
numpy10
gaussian-processes10
mcmc10
pymc10
bayesian10
tensorflow10

Programming languages (22)

JavaC++CSSRustTeXVueElmGo

Github contributions (5)

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pymc-devs/pymc2

Nov 2016 - Apr 2020

THIS IS THE **OLD** PYMC PROJECT (VERSION 2). PLEASE USE PYMC INSTEAD:
Role in this project:
userBack-end Developer
Contributions:3 releases, 23 commits, 79 PRs in 3 years 5 months
Contributions summary:Christopher primarily contributed to bug fixes and enhancements within the PyMC2 project. Their work includes adding Python 3 compatibility to existing code, fixing a divide-by-zero error, and addressing equation references in documentation. Furthermore, the user was involved in incrementing the version number and removing deprecated arguments. These changes suggest a focus on maintaining and updating the codebase.
sarifpythondubpymcnetwork-tools
fonnesbeck/Bios8366

Oct 2016 - Jun 2022

Advanced Statistical Computing at Vanderbilt University Medical Center's Department of Biostatistics
Role in this project:
userData Scientist
Contributions:315 commits, 7 PRs, 435 pushes in 5 years 8 months
Contributions summary:Christopher overhauled a Bayesian computation notebook, introducing concepts related to Bayesian inference and estimation. They implemented example models using a binomial model and beta distributions to demonstrate posterior estimation through optimization. The user also worked on model comparison by fitting various models and used criteria to select the best model.
centerpythonr-programminglinear-modelsstatistical
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Christopher Fonnesbeck - Principal Data Scientist