Connor French

Data Scientist

Town of Gardiner, New York, United States
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Summary

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Senior
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Connor French is a data scientist and engineer in biotech with eight years of experience building end-to-end data workflows that connect 'omics and NGS outputs to cloud storage and analytics, and he now applies that expertise at Sarepta Therapeutics. He combines strong computational biology roots (PhD in Ecology & Evolutionary Biology) with hands-on engineering—authoring open-source Python and R tools, developing Nextflow/Targets pipelines, and shipping Shiny/Quarto dashboards that replace costly proprietary software. His work spans preclinical and rare-disease drug development, from revamping peak-detection algorithms to accelerate discovery to modeling genomic and immunological data with ML and statistics. A seasoned scientific consultant and workshop instructor, he has a track record of translating complex biology for non-experts and securing grant funding to drive collaborative, interdisciplinary projects.
code8 years of coding experience
job8 years of employment as a software developer
bookBachelor of Science - BS, Ecology and Evolutionary Biology, Bachelor of Science - BS, Ecology and Evolutionary Biology at The University of Texas at Austin
bookDoctor of Philosophy - PhD, Ecology and Evolutionary Biology, Doctor of Philosophy - PhD, Ecology and Evolutionary Biology at The Graduate Center, City University of New York
bookMaster of Science - MS, Zoology/Animal Biology, Master of Science - MS, Zoology/Animal Biology at Southern Illinois University, Carbondale
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Stackoverflow

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Github Skills (44)

forge10
genetics9
genetic9
genomics8
version-control8
conda8
simulation8
simulate8
r-package7
bioinformatics7
biodiversity7
sequence7
python6
multidimensional6
ckan5

Programming languages (4)

RHTMLJupyter NotebookPython

Github contributions (5)

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connor-french/spaceprime

Apr 2024 - Aug 2024

A python package to facilitate spatially explicit coalescent modeling in msprime
Contributions:6 releases, 17 PRs, 98 pushes in 4 months
Contributions:1 release, 26 pushes, 2 branches in 3 years 8 months
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Connor French - Data Scientist