Constantin Ahlmann-eltze
Senior Research Investigator
Stony Stratford, England, United Kingdom
Summary
👤
Senior🎓
Top SchoolConstantin Ahlmann-eltze is a computational biologist and Senior Research Investigator with a decade of experience applying machine learning to single-cell transcriptomics and perturbation data. He has invented algorithms to predict subpopulation-specific drug responses, contributed performance improvements to DESeq2, and published six first-author papers with three in top journals. His research software is used by thousands monthly, reflecting a strong track record of building reproducible tools alongside methodological advances. He has bridged academia and industry through postdoctoral roles at EMBL, Heidelberg and UCL and now leads research at Isomorphic Labs, focusing on interpretable models for complex biological systems. An early background in statistical modeling, proteomics and geospatial analytics gives him an uncommon mix of deep domain knowledge and broad engineering chops.
10 years of coding experience
6 years of employment as a software developer
Doctor of Philosophy - PhD, Computational Biology, Doctor of Philosophy - PhD, Computational Biology at European Molecular Biology LaboratoryMaster’s Degree, Molekulare Biotechnologie, Master’s Degree, Molekulare Biotechnologie at Heidelberg University
German, English
Stackoverflow
2,126reputation
417kreached
14answers
3questions
r
top-5%
boxplot
top-1%
Github Skills (147)
parser10
asterisk10
mass10
statistic10
data-transformation10
regression10
gene-expression10
bioconductor10
rcpp10
core-package10
ggplot10
glm10
matrix10
in-progress10
r10
Programming languages (13)
Github contributions (5)
const-ae/sparseMatrixStats
Sep 2019 - Dec 2022
Implementation of the matrixStats API for sparse matrices
Contributions:247 commits, 4 PRs, 167 pushes in 3 years 3 months
sparse-matricesapimatricessparse
const-ae/motif_plotter
Oct 2016 - Apr 2019
Contributions:20 commits, 1 push, 1 branch in 2 years 5 months
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