Costas Bouyioukos
Chercheur at Université Paris Cité
Paris, Ile-de-France
Summary
👤
Senior🎓
Top SchoolCostas Bouyioukos is a computational biologist and assistant professor with 13+ years bridging systems, synthetic and evolutionary genomics through rigorous computational modelling and multi-omics analysis. Trained in biotechnology and holding a PhD in Computational Biology from the University of East Anglia, he has developed scientific computing frameworks to study how spatial genome organisation shapes gene regulatory network dynamics and chromosome folding. His work spans NGS pipeline development, CAD-like tools for genome architecture, and network-driven integrative analyses applied across plants and mammals, with roles at Université Paris Cité, CNRS iSSB and The Sainsbury Laboratory. Fluent in Python, R and shell scripting, he pairs deep programming skills with domain expertise in epigenomics and comparative genomics, and he also runs academic initiatives such as @parisepigenetics. An oft-overlooked thread in his career is consistent methodological development—from evolutionary computation in phylogenetics to practical simulation tools for exon capture—that connects theory to reproducible bioinformatics practice.
13 years of coding experience
6 years of employment as a software developer
Master of Science (MSc), Advanced Biotechnology, 98, Master of Science (MSc), Advanced Biotechnology, 98 at Agricultural University of AthensPhD, Computational Biology, PhD, Computational Biology at University of East Anglia
Greek, English, French
Stackoverflow
185reputation
26kreached
5answers
1question
Github Skills (35)
gene-expression10
mathematica9
scatter-plot9
genome9
regression-models9
genomics8
hypothesis-testing8
bioinformatics8
r8
ids6
macos6
nodejs6
ggplot6
sequencing6
plot6
Programming languages (6)
Github contributions (5)
parisepigenetics/riboproanalysis
Jul 2018 - May 2022
Contributions:6 releases, 4 pushes, 11 tags in 3 years 10 months
cbouyio/perl_modules_TSL
Mar 2013 - Mar 2022
Contributions:5 commits, 3 pushes in 9 years 2 months
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