Cyril Firmo
Lead Developer at Vitalliance
Greater Paris Metropolitan Region France
Summary
👤
Senior🎓
Top SchoolCyril Firmo is a lead developer based in Greater Paris with over a decade of experience bridging bioinformatics and software engineering. Trained as a biologie-informatique master, he built analysis pipelines, QC tools and user interfaces for genomic sequencing at institutions like CEA, INRA, Institut Pasteur and ENS before transitioning to lead development roles at Vitalliance. He combines strong programming skills (C, Python, Java, R, SQL, JavaScript, PHP) with hands-on domain knowledge in genomics and lab diagnostics, enabling pragmatic solutions that serve both researchers and production teams. Fluent in French, Creole and English, he is comfortable operating across multilingual, multidisciplinary environments. Notably, his background as a lab technician gives him practical insight into the end-to-end data lifecycle from sample collection to computational analysis, informing robust tooling and automation.
10 years of coding experience
Master 2, Biologie informatique, Admis, Master 2, Biologie informatique, Admis at Université Denis Diderot (Paris VII)
French, English, Spanish, Japanese, créole
Github Skills (15)
rna-seq10
seq10
sequencing9
illumina9
genomics8
bioinformatics8
chip-seq7
snakemake7
java7
pipeline7
data-processing6
nextflow6
pipeline-framework5
workflow-engine4
galaxy4
Programming languages (2)
Github contributions (5)
GenomiqueENS/aozan
Jul 2016 - Sep 2016
An automated post sequencing data processing pipeline for Illumina HiSeq
Contributions:84 commits, 35 pushes, 3 branches in 2 months
pipelinehiseqsequencing-datadata-processingprocessing-pipeline
GenomiqueENS/dockerfiles
Dec 2015 - Sep 2016
Contributions:3 commits, 3 pushes, 3 tags in 9 months
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