Darrin Lemmer
Bioinformatics Lead
Flagstaff, Arizona, United States
Summary
👤
Senior🎓
Top SchoolDarrin Lemmer is a Bioinformatics Lead and software engineer with over a decade of experience building production-grade bioinformatics pipelines, databases, and web applications. He combines deep expertise in Java and C++ with practical genomics know-how, having designed tools like the Amplicon Sequencing Analysis Pipeline (ASAP) and contributed to NASP, PIMS and a LIMS replacement. At TGen he leads a small team, manages concurrent projects, and translates lab needs into user-friendly scripts and modules that lower the barrier to command-line analysis. Earlier roles at IBM honed his enterprise software, database design, and customer-facing skills across large-scale Java web systems. Based in Flagstaff, AZ, he brings a rare blend of hands-on wet-lab experience and production software engineering that accelerates pathogen genomics research.
13 years of coding experience
14 years of employment as a software developer
BS, Computer Science, 3.37/4.0, BS, Computer Science, 3.37/4.0 at Michigan Technological UniversityMS, Bioinformatics, 3.75/4.0, MS, Bioinformatics, 3.75/4.0 at Iowa State University
Github Skills (14)
genomics8
bioinformatics8
sequencing7
pipeline6
bam5
tabix4
python4
api3
simulation3
simulator3
htslib3
bcftools2
sam2
samtools2
Programming languages (2)
Github contributions (5)
TGenNorth/vipr
May 2016 - Aug 2020
Contributions:2 commits, 1 push, 1 comment in 4 years 3 months
TGenNorth/NASP
Nov 2013 - Dec 2019
Contributions:1 release, 105 commits, 44 pushes in 6 years 1 month
bioinformaticssnppipelinegenomics
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