Davy Cats
Bioinformatician
Leiden, South Holland, Netherlands
Summary
🤩
Rockstar🎓
Top SchoolDavy Cats is a bioinformatician based in Leiden with nine years of experience applying computational methods to biomedical research at Leiden University Medical Center. He combines hands-on data management and pipeline work with practical packaging expertise, contributing DevOps-style Conda recipes to the widely used bioconda ecosystem. Comfortable across sequencing data submission, tooling for reproducible analysis, and clinical research environments, he brings reliable operational knowledge to bioinformatics projects. Colleagues can expect someone who bridges lab-facing data workflows and software distribution, smoothing the path from raw data to reusable computational tools.
9 years of coding experience
havo, Natural Sciences, havo, Natural Sciences at Het Groene Hart LyceumBachelor of Science - BS, Bioinformatics, Bachelor of Science - BS, Bioinformatics at Hogeschool Leiden
English, Dutch
Github Skills (12)
bioinformatics10
sh10
script10
bash10
conda10
shell10
package-management10
scripting10
java9
javas9
github-ci4
githubaction-workflow4
Programming languages (14)
Github contributions (5)
bioconda/bioconda-recipes
Jul 2018 - Sep 2022
Conda recipes for the bioconda channel.
Role in this project:
DevOps Engineer
DevOps EngineerContributions:2 reviews, 21 commits, 40 PRs in 4 years 2 months
Contributions summary:Davy's contributions primarily involve the creation and modification of build scripts and shell scripts related to packaging and distribution within the bioconda ecosystem. The commits involve adding recipes for new bioinformatics tools and updating existing recipes. The user demonstrated familiarity with Conda package management and the tooling used for building and managing software packages.
biocondacondabioinformaticspackage-management
biowdl/pipeline-template
Apr 2018 - Apr 2020
A pipeline template for modular pipelines
Contributions:15 PRs, 27 pushes, 14 branches in 1 year 11 months
pipeline-templatepipelinetemplatesmodularcontinuous-integration
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