Deborah Chasman
Scientist II at University of Wisconsin-Madison
Greater Madison Area United States
Summary
👤
Senior🎓
Top SchoolDeborah Chasman is a computational scientist with eight years of post-graduate research experience, currently a Scientist II at the University of Wisconsin–Madison. With a PhD in Computer Sciences, she develops and applies machine learning and network-inference methods to dissect regulatory interactions and environmental drivers of early immune development and allergic disease. Her work bridges high-throughput 'omics, chromatin feature prediction, and electronic phenotyping to generate experimentally testable hypotheses and prioritize candidate genes. Based in Madison, she combines deep methodological expertise with hands-on translational collaborations in obstetrics and gynecology, and maintains an ORCID record for her scholarly contributions. An early background in teaching and theater tech hints at strong communication skills and a pragmatic, collaborative approach to complex experimental problems.
8 years of coding experience
14 years of employment as a software developer
PhD, Computer Sciences, PhD, Computer Sciences at University of Wisconsin-MadisonBA, Computer Science, BA, Computer Science at Carleton College
Github Skills (63)
complexheatmap10
single-cell-genomics9
bioinformatics9
cran9
genomics9
motif8
heatmap8
tidy8
viridis8
tidyverse8
tibble8
candidate8
r-package7
amino7
dplyr7
Programming languages (4)
Github contributions (5)
Roy-lab/Escarole
Sep 2018 - Apr 2020
Contributions:1 push, 1 comment in 1 year 8 months
deborah-chasman/microbiome-pipeline
Oct 2021 - Jan 2022
A pipeline for processing 16S / ITS data
Contributions:2 PRs, 7 pushes, 13 branches in 3 months
deltapipelinepipeline-framework16starantool
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