Delphine Lariviere
Research Assistant Professor at Penn State University
Raleigh, North Carolina, United States
Summary
🤩
Rockstar🎓
Top SchoolDelphine Lariviere is a Research Assistant Professor with 11 years of experience specializing in genomics, epigenetics, and computational biology, currently based in Raleigh, NC. She designs and implements reproducible workflows for RNA-seq, bacterial genome assembly, variant detection, TnSeq and ML-driven analyses, and builds training frameworks to translate complex bioinformatics into accessible tutorials. At Penn State she develops Galaxy-based training materials and a Markdown-to-training pipeline (including video generation) and regularly leads hands-on workshops, reflecting a strong educator-researcher blend. Her doctoral work focused on synteny-aware algorithms for gene family evolution and integrative visualization tools, giving her deep roots in comparative genomics and algorithm development. An active contributor to the Galaxy training repository, she pairs rigorous research with practical tooling and documentation that accelerates adoption across the scientific community.
11 years of coding experience
10 years of employment as a software developer
Doctorat, Bioinformatique, Mention Honorable, Doctorat, Bioinformatique, Mention Honorable at Montpellier SupAgroMaster's degree, Computational Biology, Mention Assez Bien, Master's degree, Computational Biology, Mention Assez Bien at Université Denis Diderot (Paris VII)Master's degree, Biotechnologies, Mention très honorable avec Félicitations du jury, Master's degree, Biotechnologies, Mention très honorable avec Félicitations du jury at Sup'Biotech
French, English
Github Skills (8)
user-manual10
galaxy10
markdown10
markdown-it10
trainings10
learn-ruby-on-rails10
basics10
slide10
Programming languages (6)
Github contributions (5)
galaxyproject/training-material
Aug 2017 - Mar 2022
A collection of Galaxy-related training material
Role in this project:
Technical Writer
Technical WriterContributions:18 reviews, 101 commits, 17 PRs in 4 years 8 months
Contributions summary:Delphine's commits primarily involve adding and modifying slides, suggesting a focus on creating and refining training materials. These materials are geared towards genome assembly using the Unicycler tool within the context of the Galaxy platform. The commits demonstrate an understanding of the software's functionality and educational best practices. The user is dedicated to the creation of tutorials for the scientific community.
chip-seqmetagenomicsrnaseqtraining-materialusegalaxy
Delphine-L/galaxy
Dec 2016 - Mar 2025
Data intensive science for everyone.
Contributions:2 PRs, 22 pushes, 6 branches in 8 years 4 months
intensivepythonsciencedata-science
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