Meleshko Dmitrii
Senior Bioinformatics Scientist
New York, New York, United States
Summary
👤
Senior🎓
Top SchoolDmitrii Meleshko is a Senior Bioinformatics Scientist with 11 years of experience combining rigorous academia and hands-on software development in computational biology. Currently based in New York, he balances industry work at Biotech Campus with academic duties at ITMO, and is completing graduate studies in Computational Biology and Medicine at Cornell. His background spans C++ scientific software, genome assembly contributions (notably performance and edge-case fixes to the widely used SPAdes assembler), and algorithmic bioinformatics research from St. Petersburg University. Comfortable across research, teaching, and production code, he brings a rare mix of information-security training and deep algorithmic expertise to biotech problems. Colleagues describe him as a New Yorker at heart and an enthusiastic geek, with a Google Scholar profile reflecting an active publication record.
11 years of coding experience
5 years of employment as a software developer
Engineer's degree, Information security, 5.0, Engineer's degree, Information security, 5.0 at Дальневосточный Государственный Университет Путей Сообщения (ДВГУПС)Master's degree, Algorithms and data mining in bioinformatics, 4.92, Master's degree, Algorithms and data mining in bioinformatics, 4.92 at St. Petersburg University of the Russian Academy of SciencesGraduate school, Computational biology and medicine, Graduate school, Computational biology and medicine at Cornell University
Русский, English, japaneese
Github Skills (18)
algorithm10
algorithms10
c-language10
data-structure10
optmization10
performance-optimization10
optimisation10
genome-assembly10
data-structures10
cprogramming-language10
optimization10
assembly9
assemble9
assembler9
sequencing9
Programming languages (5)
Github contributions (5)
ablab/spades
Mar 2018 - Jun 2022
SPAdes Genome Assembler
Role in this project:
Back-end Developer
Back-end DeveloperContributions:1 release, 69 commits, 1 PR in 4 years 2 months
Contributions summary:Meleshko primarily focused on fixing bugs and improving the performance of the SPAdes genome assembler. Their contributions include addressing edge cases in the simplification module, fixing typos in the help documentation, optimizing weak edge construction, and adding progress tracking information. The commits demonstrate expertise in the codebase, particularly in the domain graph construction and domain matching areas of the project.
bioinformaticsgenomeassemblerspadesgenome-assembly
1dayac/bxtools
Feb 2018 - Dec 2021
Contributions:91 commits, 106 pushes, 1 branch in 3 years 10 months
analyzing10xgenomics-datagenomicsbioinformatics
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