DV Klopfenstein, PhD

PhD, Biomedical Engineering at Drexel University

Philadelphia, Pennsylvania, United States
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Summary

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DV Klopfenstein, PhD is a biomedical engineer blending 11 years of technical experience with a deep background in electrical engineering to accelerate translation of biochemical research into human health improvements. Currently a doctoral researcher at Drexel University, he partners with microbiologists and biochemists while leveraging command-line tooling, Python, R, Linux/UNIX, Vim, and git to mine big data, perform bioinformatics, and produce reproducible scientific software. He has published an R-based tool in Scientific Reports and brings prior industry expertise designing large ASIC/FPGA verification environments that enabled first-pass success. Comfortable bridging academia and engineering, he applies systems-level thinking from hardware design to build robust computational workflows for laboratory-scale discovery. Based in Philadelphia, he combines rigorous PhD training with practical coding and verification chops to move complex projects from prototype to impact.
code11 years of coding experience
job13 years of employment as a software developer
bookDoctor of Philosophy - PhD, Biomedical/Medical Engineering, Doctor of Philosophy - PhD, Biomedical/Medical Engineering at Drexel University
bookBSEE, Electrical Engineering, BSEE, Electrical Engineering at Rensselaer Polytechnic Institute
languagesEnglish
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Github Skills (166)

libgit210
python10
command-line-tool10
prediction10
genomics10
bam10
statistics10
ncbi10
econometrics10
regression-models10
htslib10
statsmodels10
espn10
generalized-linear-models10
fdr10

Programming languages (11)

JavaCRustMakefileJavaScriptGoHTMLVim script

Github contributions (5)

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tanghaibao/goatools

Mar 2015 - Jan 2023

Python library to handle Gene Ontology (GO) terms
Contributions:1282 commits, 29 PRs, 746 pushes in 7 years 10 months
python-librarypythongene-set-enrichmentgene-ontologyfdr
dvklopfenstein/timetracker

Jan 2025 - Apr 2025

Pandas-friendly time tracking from the CLI
Contributions:10 releases, 68 PRs, 349 pushes in 2 months
clicollaborationcsvcsv-exportcsv-reading
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DV Klopfenstein, PhD - PhD, Biomedical Engineering at Drexel University