Edahí Avalos
Bioinformatics Scientist II
San Diego, California, United States
Summary
👤
Senior🎓
Top SchoolEdahí Avalos is a Bioinformatics Scientist II with a PhD in Bioinformatics and nine years of experience applying machine learning and large-scale dataset engineering to clinical and research genomics. Based in San Diego, she contributes to Guardant Health's CDx programs, developing validation-focused software and pipelines used in multiple PMA projects. Her work spans V&V, pipeline development with Snakemake and Docker, and curation/processing of thousands of public datasets, showing a blend of reproducible research and production engineering. Comfortable in collaborative, multi-contributor open-source environments, she leverages academic training from UC San Diego and hands-on metagenomics and immunology internships to bridge method development and regulated product delivery.
9 years of coding experience
2 years of employment as a software developer
University of California, San DiegoUniversidad Nacional Autónoma de México (UNAM)Student Intern, Metagenomics, Student Intern, Metagenomics at IBt - Instituto de Biotecnología UNAMStudent Internship, Immunology, Student Internship, Immunology at Instituto de Biotecnología UNAM
Spanish, English
Stackoverflow
11reputation
802reached
1answer
0questions
Github Skills (17)
python7
sphinx-extension6
fortran6
sphinx6
markdown6
restructuredtext6
documentation5
documentation-generator5
linux5
conda5
package-management4
ecosystem3
sphinx-doc3
package-manager2
pipeline2
Programming languages (2)
Github contributions (5)
Edahi/NGSDataAnalysis
Feb 2019 - May 2021
Contributions:13 commits, 50 pushes, 1 branch in 2 years 3 months
Edahi/hello-world
Sep 2016 - Sep 2016
Contributions:2 PRs, 1 push, 4 branches in 1 day
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