Edward Wallace
Sir Henry Dale Fellow at University of Edinburgh
Greater Edinburgh Area United Kingdom
Summary
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Senior🎓
Top SchoolEdward Wallace is a quantitative biologist and Sir Henry Dale Fellow at the University of Edinburgh who combines a PhD in Mathematics with 11+ years of research experience studying dynamic RNA and protein regulation in fungi. He leads an interdisciplinary lab using mathematical modeling, Bayesian fitting, next-generation sequencing, proteomics and classical biochemistry to disentangle signal from physiological noise in co- and post-transcriptional gene regulation. His work spans basic and translational questions in Saccharomyces cerevisiae and the pathogen Cryptococcus neoformans, with a practical eye toward improving and controlling recombinant protein production under industrial fermentation conditions. Known for rigorous model-data integration, he offers industry collaborations on RNA-seq experimental design and fungal protein synthesis optimization, and has a track record of securing competitive funding from Wellcome Trust and the Royal Society.
11 years of coding experience
BA (Hons), Mathematics, BA (Hons), Mathematics at University of CambridgeHarvard UniversityPhD, Mathematics, PhD, Mathematics at University of Chicago
French, English
Github Skills (164)
ecology10
dataflow10
slurm10
seq10
tidyverse10
pipeline-framework10
quantitative10
genomics10
bedtools10
data-driven10
reproducible-science10
r10
singularity10
minhash10
nextflow10
Programming languages (15)
Github contributions (5)
ewallace/protocols
Feb 2015 - Sep 2020
Lab protocols from Edward Wallace
Contributions:54 commits, 1 PR, 22 pushes in 5 years 7 months
protocolwallaceedwardlabprotocols
ewallace/Ssd1_CRACanalysis_2020
Oct 2020 - Jan 2022
Analysis of RNA binding by S. cerevisiae Ssd1, mostly CRAC sequencing data, August 2020 through June 2021
Contributions:3 releases, 9 PRs, 39 pushes in 1 year 2 months
bindingaugustyeastsequencing-datasequencing
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