Emre Ozdemir
Scientific Coordinator
Kongens Lyngby, Capital Region of Denmark, Denmark
Summary
👤
Senior🎓
Top SchoolEmre Ozdemir is a scientific coordinator and researcher with 11 years of experience bridging metabolic modeling, synthetic biology and biosustainability. Trained with a PhD from EPFL and an MSc in Computational Sciences, he has led multidisciplinary projects at The Novo Nordisk Foundation Center for Biosustainability and now at BRIGHT, translating systems-level metabolic insights into practical bioprocess and engineering decisions. His work spans computational metabolic modeling, experimental studies of carbon and energy metabolism (including Mycobacterium tuberculosis), and structure-based drug design from earlier training, giving him uncommon fluency across wet-lab and in silico workflows. Based in Kongens Lyngby, Denmark, he is skilled at coordinating teams and complex research programs to deliver reproducible, application-oriented science. A persistent theme in his career is turning deep mechanistic understanding into scalable biosustainability solutions, often navigating between academic rigor and industry-driven timelines.
11 years of coding experience
4 years of employment as a software developer
Doctor of Philosophy (PhD) Biotechnology and bioengineering, Doctor of Philosophy (PhD) Biotechnology and bioengineering at EPFLMSc Computational Sciences and Engineering, MSc Computational Sciences and Engineering at Koç UniversityBSc Molecular Biology and Genetics, BSc Molecular Biology and Genetics at Orta Doğu Teknik Üniversitesi / Middle East Technical University
Turkish, English
Github Skills (93)
genomes10
azure10
microsoft-azure9
genome-assembly9
microsoft9
simulation9
rates9
optimization8
overlay8
bioinformatics8
d3js8
biology8
blast7
file-parser7
pip7
Programming languages (9)
Github contributions (5)
biosustain/croissance
Oct 2018 - Aug 2021
Tool for estimating growth rates from microbial growth curves
Contributions:3 releases, 20 commits, 4 PRs in 2 years 10 months
ratesgrowth-curvesestimatingmicrobialcurves
biosustain/library_to_samplesheet
Sep 2019 - Mar 2021
Contributions:10 releases, 3 PRs, 15 pushes in 1 year 5 months
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