Eran Agmon
Associate Professor
Greater Hartford United States
Summary
👤
Senior🎓
Top SchoolEran Agmon is a computational biologist and faculty affiliate with 12 years of experience building compositional systems for whole-cell and microbial community modeling. Currently an assistant professor at UConn Health and a faculty affiliate at the Center for Chemical Currencies of a Microbial Planet, he combines academic research with hands-on software development honed during a postdoc at Stanford. His work bridges informatics, cognitive science, and systems biology to create reproducible, data-driven models of cellular systems. Known for integrating large-scale modeling with practical tooling, he brings both theoretical depth from a PhD in Informatics and pragmatic engineering experience that speeds hypothesis-to-analysis cycles.
12 years of coding experience
10 years of employment as a software developer
University of California, San DiegoPhD Informatics and Computing, PhD Informatics and Computing at Indiana University BloomingtonMS Systems Science, MS Systems Science at Portland State University
Hebrew, English
Github Skills (22)
engine10
vega9
biology9
simulation9
combine9
sbml9
modeling9
computational-biology9
systems-biology8
command-line-interface8
visualizations8
copasi7
python7
validating6
docker-container6
Programming languages (6)
Github contributions (5)
vivarium-collective/vivarium-chemotaxis
Sep 2020 - Jan 2023
Contributions:9 PRs, 44 pushes, 16 branches in 2 years 4 months
CovertLab/vivarium
May 2019 - Aug 2020
a multi-scale simulation platform for whole-cell modeling
Contributions:398 PRs, 1838 pushes, 631 branches in 1 year 2 months
simulation
Find and Hire Top DevelopersWe’ve analyzed the programming source code of over 60 million software developers on GitHub and scored them by 50,000 skills. Sign-up on Prog,AI to search for software developers.