Erik Lee
Senior Neuroimaging Analyst at University of Minnesota
Saint Paul, Minnesota, United States
Summary
👤
Senior🎓
Top SchoolErik Lee is a Senior Neuroimaging Analyst with nine years of experience applying engineering rigor to neuroimaging and neuromodulation research across top academic medical centers. With a BS in Electrical Engineering and ongoing MS work in Bioinformatics and Computational Biology, he builds reproducible, containerized imaging pipelines and manages large multi-site studies using HPC and cloud infrastructure. He has a track record of translating numerical modeling and finite-element TMS simulations into clinically actionable imaging analyses and data standards. Comfortable interfacing with clinicians, developers, and informatics teams, he combines hands-on technical execution with study coordination and automated documentation practices. Driven by a long-standing interest in noninvasive brain stimulation, he plans to continue into graduate research bridging neuroengineering and clinical impact.
9 years of coding experience
4 years of employment as a software developer
Bachelor of Science (BS), Electrical and Electronics Engineering, Bachelor of Science (BS), Electrical and Electronics Engineering at Iowa State UniversityMaster of Science - MS (in progress), Bioinformatics and Computational Biology, Master of Science - MS (in progress), Bioinformatics and Computational Biology at University of Minnesota
English
Github Skills (27)
bids9
mri8
neuroimaging8
intervention8
image-processing8
brain-imaging8
preprocessing8
post-processing7
segmentation7
pipeline7
mask7
mod-manager6
feature-extraction6
diffusion-mri5
deep-learning5
Programming languages (7)
Github contributions (5)
erikglee/hbcd_symri_relaxometry_workflow
Dec 2023 - Sep 2024
Scripts that manage grabbing dicom archives containing QALAS images, converting them to relaxometry maps as BIDS derivatives, and reuploading to S3
Contributions:7 PRs, 92 pushes, 9 branches in 9 months
DCAN-Labs/OSPREY_BIDS
Nov 2022 - Oct 2024
Houses the Dockerfile used to compile OSPREY
Contributions:1 release, 4 PRs, 108 pushes in 1 year 11 months
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