Erin Weisbart
Senior Computational Scientist, Lead Image Analyst
Greater Seattle Area United States
Summary
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Rockstar🎓
Top SchoolErin Weisbart is a Senior Computational Scientist and Lead Image Analyst with a Ph.D. in Cell Biology and six years of hands-on experience building and automating high-content image analysis workflows at the Broad Institute. She specializes in scaling image pipelines to the cloud using AWS and DistributedScience tools, translating qualitative microscopy observations into robust, reproducible quantitative analyses. Known for meticulous documentation and process-driven collaboration, she streamlines workflows and manages complex projects across disease-focused teams. Erin also brings an unusual mix of scientific rigor and creative communication from years as a freelance science and sewing writer and small-business founder, helping her tell clear stories with data.
6 years of coding experience
9 years of employment as a software developer
Doctor of Philosophy (Ph.D.), Cell/Cellular and Molecular Biology, Doctor of Philosophy (Ph.D.), Cell/Cellular and Molecular Biology at University of California, San FranciscoB.A., Biochemistry, B.A., Biochemistry at Lewis & Clark College
Spanish, English
Github Skills (61)
recipe10
amazon-web-services10
cellprofiler10
amazon10
microscopy10
image-processing9
python9
hammer9
image-analysis9
mass-spectrometry9
docker9
aws9
neuroimaging9
bioinformatics9
profiling8
Programming languages (6)
Github contributions (5)
DistributedScience/Distributed-OMEZarrCreator
Mar 2022 - May 2024
Run encapsulated docker containers with BioFormats2Raw in the Amazon Web Services infrastructure.
Contributions:3 releases, 4 PRs, 36 pushes in 2 years 2 months
awsdistributeddistributed-computingngffome-zarr
broadinstitute/2022_PERISCOPE
Jul 2023 - Mar 2025
This repository contains all supporting analyses and files for Ramezani, Weisbart, Bauman, and Singh, et al. "A genome-wide atlas of human cell morphology".
Contributions:7 PRs, 44 pushes, 5 branches in 1 year 8 months
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