Ernesto Gallego

Senior Bioinformatician

Cambridge, England, United Kingdom
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Summary

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Senior
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Ernesto Gallego is a Senior Bioinformatician based in Cambridge with 11 years’ experience applying computational genomics to precision medicine and cancer research. He has built and productionised numerous NGS pipelines and scientific software—from multi-caller somatic variant discovery workflows to BAM QC and benchmarking tools—while managing compute infrastructure and containerised deployments. His background combines a PhD in Immunogenetics and Evolutionary Biology with an MSc in Biostatistics, giving him deep domain knowledge in variant interpretation and rigorous quantitative skills. At EMBL-EBI he contributed pipelines and a Python package used for large-scale data releases (1000 Genomes, HGSV, HGDP), and now leads somatic variant identification efforts at Biofidelity. Colleagues rely on him for translating complex experimental goals into robust, reproducible analyses and scalable tooling. Beyond routine pipeline work, he has a track record of enabling community data releases and web infrastructure for major genomics consortia.
code11 years of coding experience
job13 years of employment as a software developer
bookMSc in Biostatistics, Biostatistics, MSc in Biostatistics, Biostatistics at Universitat Autònoma de Barcelona
bookBiology, Molecular Biology, Biology, Molecular Biology at Universidad de Alcalá
bookPhD, Immunogenetics, Evolutionary Biology, PhD, Immunogenetics, Evolutionary Biology at Universidad Complutense de Madrid
languagesSpanish, English
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Github Skills (58)

oanda10
bam10
perl10
genomes10
rna-seq10
jupyter-notebook10
forex-trading10
bcftools10
python9
samtools9
api9
filtering9
opcodes8
quantile8
bioinformatics8

Programming languages (8)

TypeScriptMDXC++CPerlJupyter NotebookGroovyPython

Github contributions (5)

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FOREXfunguru/FOREX

Nov 2016 - Feb 2023

Python library to handle different kind of operations with the OANDA API
Contributions:456 commits, 108 PRs, 571 pushes in 6 years 3 months
python-libraryapipythonoandainvesting
biodata-fun/CPP

Jul 2019 - Mar 2021

Contributions:40 commits, 39 pushes, 1 branch in 1 year 8 months
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Ernesto Gallego - Senior Bioinformatician