Etienne Rifa
Ingénieur Biostatisticien Bioinformaticien
Greater Toulouse Metropolitan Area France
Summary
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Senior🎓
Top SchoolEtienne Rifa is a biostatistics and bioinformatics engineer with over nine years at INRAE and TBI, specializing in high-throughput genomics data processing (metabarcoding 16S, RNA-seq, de novo assembly) across Illumina, Ion Torrent and ONT platforms. He codes routinely in R, Python, Perl and Bash in Linux, develops R packages and interactive Shiny apps (ExploreMetabar, GraphstatsR) and maintains tools such as rANOMALY and the curated DAIRYdb reference for improved 16S taxonomy. His work blends rigorous multivariate statistical analysis and practical workflow engineering for core facilities (GeT-Biopuces, MetaboHUB-MetaToul), enabling reproducible community analysis pipelines. Beyond routine pipelines he teaches metagenomics and has a track record of turning complex sequence-analysis challenges into user-friendly tools and online services.
9 years of coding experience
Master, Biostatistiques et Modélisation, Master, Biostatistiques et Modélisation at Université Paul Sabatier (Toulouse III)
Stackoverflow
11reputation
1kreached
1answer
0questions
Github Skills (46)
r-package7
traits7
duplicate-detection7
multilevel7
shiny6
pca6
poisson6
difference6
addin6
r6
pairwise5
matcher4
htmlwidgets4
similarity4
red4
Programming languages (6)
Github contributions (5)
erifa1/ranomaly
Nov 2020 - Dec 2024
Contributions:33 pushes, 3 branches in 4 years 1 month
erifa1/ExploreMetabar
Feb 2020 - Dec 2022
Contributions:3 releases, 16 pushes, 3 branches in 2 years 9 months
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