Fábio Madeira
Software Engineer - Technical Team Project Lead at European Bioinformatics Institute | EMBL-EBI
Cambridge, England, United Kingdom
Summary
👤
Senior🎓
Top SchoolFábio Madeira is a software engineer and technical team project lead with 14 years of experience building bioinformatics tools and APIs at EMBL-EBI in Cambridge. He combines a strong computational biology research background (PhD) with hands-on engineering, leading delivery of production-grade services that bridge research and developer ecosystems. Comfortable across the stack, he has a practical eye for front-end polish and CI/CD—evidenced by Jekyll theme and resume projects where he improved UI, analytics, HTTPS support and automation. Known for mentoring teams and shaping technical direction, he brings both academic rigor and product-focused pragmatism to large-scale bioinformatics software.
14 years of coding experience
6 years of employment as a software developer
Doctor of Philosophy (PhD), Computational Biology, Doctor of Philosophy (PhD), Computational Biology at University of DundeeMaster of Science (MSc), Molecular Genetics and Biomedicine, Master of Science (MSc), Molecular Genetics and Biomedicine at Universidade Nova de Lisboa
Stackoverflow
136reputation
5kreached
5answers
0questions
Github Skills (18)
javascript10
css10
jekyll10
jekyll-theme10
html10
github-pages9
cicd8
google-analytics7
phylogeny6
bioinformatics6
biopython6
ncbi6
python6
tree6
git6
Programming languages (18)
Github contributions (5)
jekyllt/vitae
Oct 2015 - May 2021
👨💼 Personal resume powered by Jekyll
Role in this project:
Full-stack Developer
Full-stack DeveloperContributions:46 commits, 5 PRs, 33 pushes in 5 years 8 months
Contributions summary:Fábio primarily focused on improving the user interface and overall functionality of the Jekyll-based personal resume project. They implemented visual enhancements with the addition of a GitHub ribbon, updated layout elements and added the website link. Furthermore, the user integrated Google Analytics for tracking and updated the codebase to support HTTPS. They also set up a CI/CD pipeline using the `cibuild.sh` script.
personal-resumestatic-sitejekyll-themesjekylljekyll-theme
jekyllt/jasper
Jun 2017 - Sep 2021
Full-featured Jekyll port of Ghost's default theme Casper 👻
Role in this project:Front-end Developer
Front-end DeveloperContributions:2 releases, 41 commits, 20 PRs in 4 years 4 months
Contributions summary:Fábio primarily contributed to the front-end aspect of the Jekyll theme, Casper. They updated CSS and JavaScript assets, including modifications to the `screen.css` file, indicating a focus on visual styling and layout. Furthermore, the user implemented support for multiple authors, modifying the layout and includes related to author information, showcasing a contribution to content structure and display. The commits reveal a focus on theme customization and enhancement within the Jekyll framework.
full-featuredstatic-siteghostjekyll-themescasper
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