Federico Marini
Head Of The Bioinformatics Group
Mainz, Rhineland-Palatinate, Germany
Summary
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Rockstar🎓
Top SchoolFederico Marini is Head of the Bioinformatics Group at the University Medical Center Mainz with 12 years of experience developing reproducible, interactive omics analysis tools and leading transcriptome and single-cell data projects. Trained as a biomedical engineer and PhD bioinformatician, he bridges statistics, genomics and biology to deliver user-centered visualization, advanced modeling and network-aware functional interpretation—most often implemented in R and Bioconductor. His work on platelet transcriptomes during a Virchow Fellowship exemplifies a niche expertise in immunology and cancer-related omics within collaborative consortia like SFB1292. As joint head of the BIUM(MZ) core facility he pairs technical leadership with hands-on software development and support for biomedical researchers. Outside the lab he balances leadership with a hands-on family life, hinting at a pragmatic, human-centered approach to complex computational problems.
12 years of coding experience
3 years of employment as a software developer
Ph.D. (Dr. rer. physiol.), Bioinformatics, Ph.D. (Dr. rer. physiol.), Bioinformatics at Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), University Medical Center MainzUniversität Karlsruhe (TH)Master's degree, Biomedical/Medical Engineering, 110/110, Master's degree, Biomedical/Medical Engineering, 110/110 at Politecnico di Milano
Italian, English, German, Spanish
Stackoverflow
1reputation
0reached
0answers
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Github Skills (200)
python10
feature-extraction10
package-management10
shinydashboard10
seq10
forge10
epic10
transcriptomics10
gene-expression10
bioconductor10
clustering10
deconvolution10
data-exploration10
r10
shiny10
Programming languages (13)
Github contributions (5)
federicomarini/simrec
Jan 2019 - Oct 2022
Simulation of recurrent event data in the total time model
Contributions:87 commits, 1 PR, 24 pushes in 3 years 9 months
totalevent-datasimulationrecurrent
federicomarini/goseq
Oct 2019 - Mar 2025
Contributions:3 PRs, 23 pushes, 6 branches in 5 years 5 months
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